iBiology Podcasts

Chronic liver diseases affect millions of people worldwide. By understanding how liver disease progresses, we may be able to identify new therapies that can protect the liver. Dr. Chrystelle Vilfranc studied the role of BRUCE, a protein that is known to be important in several cellular processes in our bodies, in liver disease. She found… Continue Reading

Is it possible to define life using math? Dr. Alyssa Adams’s research seeks to answer precisely this question. In their Share Your Research talk, Dr. Adams introduces the concept of open-ended evolution, and describes how they have developed mathematical models to help us understand how biological systems can innovate within a changing environment. These studies… Continue Reading

What does a redwood forest look like, and sound like, in the wake of a devastating fire? See a forest in a new way in this new cinematic short from the Science Communication Lab. Walk through a fire-ravaged redwood forest with experts Beatrix Jiménez, a Land Stewardship Associate at the Sempervirens Fund, Ian Bornarth, a… Continue Reading

Bat species are numerous and diverse, and are found in nearly every corner of the globe. Therefore, they serve as a valuable system to study the evolution of mammalian traits. Dr. Alexa Sadier collected field and museum samples from over 50 species of bats to ask how color vision evolved in this unique group of… Continue Reading

Dr. Alex Moore provides an introduction to coastal wetlands, including the functional role they play in our world, as well as the many ways that these ecosystems are used for economic and recreational activities. Dr. Moore discusses the traditional approach to restoring coastal wetlands, and the ways that these efforts can fall short of restoring… Continue Reading

Trees are magnificent organisms that have evolved very slowly over millions of years, making it hard for them to adapt to rapid changes in the environment. With climate change imminent, scientists estimate up to 25% of US forests will decline over the next three decades. In this film, four researchers ponder the question ”What can… Continue Reading

Nayak describes research she has done on methanogenic archaea – microorganisms that produce the potent greenhouse gas methane. One species of methanogens, Methanosarcina acetivorans, has unique chemical modifications on the enzyme it uses to produce methane. Dr. Nayak describes how she used CRISPR/Cas9 genome editing to determine that these modifications are used to protect M. acetivorans from environmental… Continue Reading

Educational science videos are commonly used in undergraduate biology instruction, but what do we know about the student perspective on them? In this paper discussion and live Q&A, Dr. Laci Gerhart-Barley and Dr. Brittany Anderton present findings from their open-access paper “Engaging students through online video homework assignments: A case study in a large-enrollment ecology… Continue Reading

Synthetic cells can be used to teach us about the basic principles of life and evolution, and they hold promise for a range of applications including biomaterials and drug development. Dr. Kate Adamala narrates an introduction to this exciting field. Continue Reading

Meningioma is the most common intracranial tumor, with limited treatment options. In order to identify new therapies for meningioma, it is important to understand their underlying biology. In this Share Your Research talk, Dr. Abrar Choudhury describes his thesis research, which began by looking at DNA methylation patterns to better understand gene regulation in meningioma,… Continue Reading

Mentors shape our careers by guiding us through difficult decisions. But, how do you find a good mentor? In this series, Dr. Joanne Kamens advocates for the use of Peer Mentoring Groups as a method to provide and receive valuable mentoring opportunities. While working towards a common goal, group mentorship allows for an organic development… Continue Reading

How do you go about forming a Peer Mentoring Group? In her second video, Kamens explains the logistics of forming a Peer Mentoring Group. First, you need to find 5-6 peers that share a similar problem. As you prepare to meet, you need to set the ground rules and provide structure to your meetings (e.g.,… Continue Reading

As Kamens explains, the commitment of the members is crucial for the success of the Peer Mentoring Group. In her third talk, Kamens overviews what are mentorship best practices while running a Peer Mentorship Group. From setting concrete content and activities to set up goals, these best practices will allow you to create an environment… Continue Reading

Life on Earth evolved once – this means that all biological systems on our planet are rooted in the same fundamental framework. This framework is extremely complex and we have yet to fully understand the processes inside each living cell. One way of understanding complex systems is to break them down into simpler parts. This… Continue Reading

Gregor Mendel’s experiments with pea plants laid the foundation for our understanding of genetic inheritance. In this video, Shirley Tilghman tells the story of Mendel’s studies and how his data led to an understanding of how the information within genes is passed from generation to generation. Continue Reading

Rodolphe Barrangou studies beneficial microbes, focusing on the occurrence and diversity of lactic acid bacteria in fermented foods and as probiotics. Using functional genomics, he has focused on uncovering the genetic basis for health-promoting traits, including the ability to uptake and catabolize non-digestible carbohydrates. He spent 9 years at Danisco-DuPont, characterizing probiotics and starter cultures,… Continue Reading

Jennifer Doudna and Emmanuelle Charpentier won the 2020 Nobel Prize in Chemistry for their development of a powerful gene editing tool known as the CRISPR-Cas9 system. In this short film, Doudna, Charpentier, and Martin Jinek, who was a post-doc at the time in Doudna’s lab, describe how their famous collaboration happened and share the story… Continue Reading

Parasitic plants are important in natural ecosystems and in agriculture. Parasitism is a successful life strategy that has convergently evolved in all kingdoms of life. Continue Reading

Do students learn more with clickers and peer-discussion? Bill Wood (University of Colorado, Boulder) describes the Knight et al. study, which looks at student learning gains in an active learning classroom that utilizes clicker questions and peer-discussion, similar to a think-pair-share. Continue Reading

Think-Pair-Share is an active learning technique that can be used in small or large enrollment courses to engage students and encourage them to practice scientific thinking skills. In think-pair-share, students think about their answer to a question, pair with a partner to debate their choice, and then share their answers with the class. In this video… Continue Reading

Clickers are Audience Response Systems that enable instructors to ask a multiple-choice question, poll students for an answer, and display the aggregated results to the class. In this video showing examples of active learning classroom models, Bill Wood (University of Colorado Boulder) describes how clickers can be used effectively to engage students. Continue Reading

How can one shift from a teacher-centered to a student-centered classroom model? What are the benefits of active learning for students and instructors? Continue Reading

What are the issues with traditional undergraduate biology education? What is the role of an educator in a 21st century college classroom? What is missing in the way we currently teach science in college? Continue Reading

We have an online Q&A (hosted on January 6th, 2021) discussing the benefits and limitations of preprints from the perspective of early-career scientists. Panelists included Jessica Polka, Elizabeth Silva (Associate Dean of Graduate Programs at UCSF and former editor at PLoS), and Kate Carbone (an industry postdoc).  Continue Reading